Resolution: 6.0 Å
EM Method: Single-particle
Fitted PDBs: 8uwx
Q-score: 0.137
Risi CM, Belknap B, Atherton J, Coscarella IL, White HD, Bryant Chase P, Pinto JR, Galkin VE
J Mol Biol (2024) 436 pp. 168498-168498 [ Pubmed: 38387550 DOI: doi:10.1016/j.jmb.2024.168498 ]
- Thin filament troponin core complex (Complex from Sus scrofa)
- Actin, alpha cardiac muscle 1 (42 kDa, Protein from Sus scrofa)
- Troponin c, slow skeletal and cardiac muscles (18 kDa, Protein from Sus scrofa)
- Troponin t2, cardiac type (33 kDa, Protein from Sus scrofa)
- Troponin i, cardiac muscle (24 kDa, Protein from Sus scrofa)
- Tropomyosin alpha-1 chain (32 kDa, Protein from Sus scrofa)
Resolution: 7.1 Å
EM Method: Single-particle
Fitted PDBs: 8uz6
Q-score: 0.148
Risi CM, Belknap B, Atherton J, Coscarella IL, White HD, Bryant Chase P, Pinto JR, Galkin VE
J Mol Biol (2024) 436 pp. 168498-168498 [ Pubmed: 38387550 DOI: doi:10.1016/j.jmb.2024.168498 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Thin filament troponin core complex (Complex from Sus scrofa)
- Actin, alpha cardiac muscle 1 (42 kDa, Protein from Sus scrofa)
- Troponin c, slow skeletal and cardiac muscles (18 kDa, Protein from Sus scrofa)
- Troponin t2, cardiac type (33 kDa, Protein from Sus scrofa)
- Troponin i, cardiac muscle (24 kDa, Protein from Sus scrofa)
- Tropomyosin alpha-1 chain (32 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
Resolution: 7.0 Å
EM Method: Single-particle
Fitted PDBs: 8v0y
Q-score: 0.15
Risi CM, Belknap B, Atherton J, Coscarella IL, White HD, Bryant Chase P, Pinto JR, Galkin VE
J Mol Biol (2024) 436 pp. 168498-168498 [ Pubmed: 38387550 DOI: doi:10.1016/j.jmb.2024.168498 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Thin filament troponin core complex (Complex from Sus scrofa)
- Actin, alpha cardiac muscle 1 (42 kDa, Protein from Sus scrofa)
- Troponin c, slow skeletal and cardiac muscles (18 kDa, Protein from Sus scrofa)
- Troponin t2, cardiac type (33 kDa, Protein from Sus scrofa)
- Troponin i, cardiac muscle (24 kDa, Protein from Sus scrofa)
- Tropomyosin alpha-1 chain (32 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
Cryo-EM structure of the human cardiac myosin filament
Resolution: 6.4 Å
EM Method: Single-particle
Fitted PDBs: 8g4l
Q-score: 0.079
Dutta D, Nguyen V, Campbell KS, Padron R, Craig R
Nature (2023) 623 pp. 853-862 [ Pubmed: 37914935 DOI: doi:10.1038/s41586-023-06691-4 ]
- Titin (119 kDa, Protein from Homo sapiens)
- Myosin regulatory light chain 2, ventricular/cardiac muscle isoform (18 kDa, Protein from Homo sapiens)
- Myosin light chain 3 (21 kDa, Protein from Homo sapiens)
- Myosin-binding protein c, cardiac-type (140 kDa, Protein from Homo sapiens)
- Myosin-7 (223 kDa, Protein from Homo sapiens)
- Myosin filaments isolated from human cardiac left ventricular muscle (Tissue from Homo sapiens)
Cryo-EM structure of the human cardiac myosin filament
Dutta D, Nguyen V, Campbell KS, Padron R, Craig R
Nature (2023) 623 pp. 853-862 [ Pubmed: 37914935 DOI: doi:10.1038/s41586-023-06691-4 ]
Cryo-EM structure of the human cardiac myosin filament
Dutta D, Nguyen V, Campbell KS, Padron R, Craig R
Nature (2023) 623 pp. 853-862 [ Pubmed: 37914935 DOI: doi:10.1038/s41586-023-06691-4 ]
48-nm repeating structure of doublets from mouse sperm flagella
Chen Z, Shiozaki M, Haas KM, Skinner WM, Zhao S, Guo C, Polacco BJ, Yu Z, Krogan NJ, Lishko PV, Kaake RM, Vale RD, Agard DA
Cell (2023) 186 pp. 5041-5053.e19 [ Pubmed: 37865089 DOI: doi:10.1016/j.cell.2023.09.017 ]
- Cilia- and flagella-associated protein 45 (65 kDa, Protein from Mus musculus)
- Ef-hand domain-containing family member b (95 kDa, Protein from Mus musculus)
- Nucleoside diphosphate kinase 7 (44 kDa, Protein from Mus musculus)
- Ef-hand domain-containing family member c2 (87 kDa, Protein from Mus musculus)
- Tektin-3 (56 kDa, Protein from Mus musculus)
- Coiled-coil domain-containing protein 105 (57 kDa, Protein from Mus musculus)
- Enkurin (29 kDa, Protein from Mus musculus)
- Tubulin beta-4b chain (49 kDa, Protein from Mus musculus)
- Tektin-1 (48 kDa, Protein from Mus musculus)
- Parkin coregulated gene protein homolog (27 kDa, Protein from Mus musculus)
- Sperm acrosome-associated protein 9 (19 kDa, Protein from Mus musculus)
- Mouse sperm (Cell from Mus musculus)
- Tektin-4 (52 kDa, Protein from Mus musculus)
- Tektin bundle-interacting protein 1 (23 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 276 (18 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 53 (62 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 141 (12 kDa, Protein from Mus musculus)
- Sperm-associated antigen 8 (50 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 52 (68 kDa, Protein from Mus musculus)
- Dual specificity protein phosphatase 3 (20 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 95 (26 kDa, Protein from Mus musculus)
- Ef-hand domain-containing protein 1 (75 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 161 (34 kDa, Protein from Mus musculus)
- Detyrosinated tubulin alpha-1a chain (50 kDa, Protein from Mus musculus)
- Piercer of microtubule wall 2 protein (13 kDa, Protein from Mus musculus)
- Meiosis-specific nuclear structural protein 1 (60 kDa, Protein from Mus musculus)
- Protein flattop (20 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 20 (22 kDa, Protein from Mus musculus)
- Protein fam166b (30 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 107 (23 kDa, Protein from Mus musculus)
- Ef-hand calcium-binding domain-containing protein 6 (176 kDa, Protein from Mus musculus)
- Rib43a-like with coiled-coils protein 2 (45 kDa, Protein from Mus musculus)
- Piercer of microtubule wall 1 protein (18 kDa, Protein from Mus musculus)
- Tektin-2 (50 kDa, Protein from Mus musculus)
- Tektin-5 (62 kDa, Protein from Mus musculus)
- Cilia- and flagella- associated protein 210 (65 kDa, Protein from Mus musculus)
In situ structure of axonemal doublet microtubules in mouse sperm with 48-nm repeat
Resolution: 6.5 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8i7r
Q-score: 0.173
Tai L, Yin G, Huang X, Sun F, Zhu Y
Cell Discov (2023) 9 pp. 116-116 [ Pubmed: 37989994 DOI: doi:10.1038/s41421-023-00606-3 ]
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Cilia- and flagella-associated protein 45 (65 kDa, Protein from Mus musculus)
- Ef-hand domain-containing family member b (95 kDa, Protein from Mus musculus)
- Dual specificity phosphatase 21 (21 kDa, Protein from Mus musculus)
- Nucleoside diphosphate kinase 7 (44 kDa, Protein from Mus musculus)
- Ef-hand domain-containing family member c2 (87 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 210 (65 kDa, Protein from Mus musculus)
- Tektin-3 (56 kDa, Protein from Mus musculus)
- Coiled-coil domain-containing protein 105 (57 kDa, Protein from Mus musculus)
- Enkurin (29 kDa, Protein from Mus musculus)
- Testis-expressed protein 43 (16 kDa, Protein from Mus musculus)
- Parkin coregulated gene protein homolog (27 kDa, Protein from Mus musculus)
- Tektin-1 (48 kDa, Protein from Mus musculus)
- Protein fam166a (36 kDa, Protein from Mus musculus)
- Cilia and flagella-associated protein 77 (32 kDa, Protein from Mus musculus)
- Tubulin beta-4b chain (47 kDa, Protein from Mus musculus)
- Sperm acrosome-associated protein 9 (19 kDa, Protein from Mus musculus)
- Tektin-4 (52 kDa, Protein from Mus musculus)
- Tektin bundle-interacting protein 1 (23 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 276 (18 kDa, Protein from Mus musculus)
- Detyrosinated tubulin alpha-3 chain (48 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 53 (62 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 52 (68 kDa, Protein from Mus musculus)
- Sperm-associated antigen 8 (50 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 141 (12 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 95 (26 kDa, Protein from Mus musculus)
- Ef-hand domain-containing protein 1 (75 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 161 (34 kDa, Protein from Mus musculus)
- Piercer of microtubule wall 2 protein (13 kDa, Protein from Mus musculus)
- Meiosis-specific nuclear structural protein 1 (60 kDa, Protein from Mus musculus)
- Protein fam166c (23 kDa, Protein from Mus musculus)
- Protein flattop (20 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 20 (22 kDa, Protein from Mus musculus)
- Cilia- and flagella-associated protein 107 (23 kDa, Protein from Mus musculus)
- Ef-hand calcium-binding domain-containing protein 6 (176 kDa, Protein from Mus musculus)
- Piercer of microtubule wall 1 protein (18 kDa, Protein from Mus musculus)
- Rib43a-like with coiled-coils protein 2 (45 kDa, Protein from Mus musculus)
- Mouse sperm (Cell from Mus musculus)
- Tektin-2 (50 kDa, Protein from Mus musculus)
- Tektin-5 (62 kDa, Protein from Mus musculus)
Resolution: 6.1 Å
EM Method: Single-particle
Fitted PDBs: 8b5r
Q-score: 0.245
van den Boom J, Marini G, Meyer H, Saibil HR
EMBO J (2023) 42 pp. e113110-e113110 [ DOI: doi:10.15252/embj.2022113110 Pubmed: 37264685 ]
- P97 complex with p37 adaptor and spi substrate (Complex from Homo sapiens)
- Ubx domain-containing protein 2b (1 kDa, Protein from Homo sapiens)
- Serine/threonine-protein phosphatase pp1-gamma catalytic subunit (37 kDa, Protein from Homo sapiens)
- I3 sequence being threaded through the p97 channel (1 kDa, Protein from Homo sapiens)
- Ubx domain-containing protein 2b (9 kDa, Protein from Homo sapiens)
- Transitional endoplasmic reticulum atpase (90 kDa, Protein from Homo sapiens)
- Protein phosphatase 1 regulatory subunit 7 (41 kDa, Protein from Homo sapiens)